SC@FIT - Supercomputing Technologies Research Group

Publications

2017GEORGIOU Panyiotis, JARO© Jiří, PAYNE Heather, ALLEN Clare, GIBSON Eli, BARRATT Dean and TREEBY Bradley E. Beam Distortion Due to Gold Fiducial Markers During Salvage High-Intensity Focused Ultrasound in the Prostate. Journal of Medical Physics. 111 River St., Hoboken, NJ 07030-5774: American Association of Physicists in Medicine, 2017, vol. 44, no. 2, pp. 679-693. ISSN 0094-2405.
 JARO© Jiří, TREEBY Bradley E. and GEORGIOU Panyiotis. Modelling Beam Distortion during Focused Ultrasound Surgery in the Prostate using k-Wave. Supercomputing in Science and Engineering. Ostrava: V©B-Technical University of Ostrava - IT4I, 2017, pp. 205-207. ISBN 978-80-248-4037-6.
 JARO© Jiří, TREEBY Bradley E. and ROBERTSON James L. Convergence Testing of a k-space Pseudospectral Scheme for Transcranial Time-reversal Focusing. Supercomputing in Science and Engineering. Ostrava: V©B-Technical University of Ostrava - IT4I, 2017, pp. 195-197. ISBN 978-80-248-4037-6.
 JARO© Jiří. High Performance Computing in Ultrasound Cancer Treatment. Brno, 2017.
 NIKL Vojtěch, HRADECKÝ Michal, JARO© Jiří and KELEČÉNI Jakub. The investigation of the ARMv7 and Intel Haswell architectures suitability for performance and energy-aware computing. In: High Performance Computing. Cham: Springer International Publishing, 2017, pp. 377-393. ISBN 978-3-319-58667-0.
 ROBERTSON James L., COX Ben T., JARO© Jiří and TREEBY Bradley E. Accurate simulation of transcranial ultrasound propagation for ultrasonic neuromodulation and stimulation. The Journal of the Acoustical Society of America. 2017, vol. 141, no. 3, pp. 1726-1738. ISSN 1520-8524.
 SUOMI Visa, JARO© Jiří, TREEBY Bradley E. and CLEVELAND Robin. Full modelling of high-intensity focused ultrasound and thermal heating in the kidney of realistic patient models. IEEE Transactions on Biomedical Engineering. 2017, vol. 2017, no. 66, pp. 1-12. ISSN 0018-9294.
 ČUDOVÁ Marta. Framework for Planning, Running and Monitoring Cooperating Computations. In: Počítačové architektúry & diagnostika PAD 2017. Bratislava: Slovak University of Technology in Bratislava, 2017, pp. 20-23. ISBN 978-80-972784-0-3.
2016BROWN Michael D., JARO© Jiří, COX Ben T. and TREEBY Bradley E. Control of Broadband Optically Generated Ultrasound Pulses Using Binary Amplitude Holograms. The Journal of the Acoustical Society of America. 2016, vol. 139, no. 4, pp. 1637-1647. ISSN 1520-8524.
 JARO© Jiří, RENDELL Alistair P. and TREEBY Bradley E. Full-wave nonlinear ultrasound simulation on distributed clusters with applications in high-intensity focused ultrasound. The International Journal of High Performance Computing Applications. 2455 Teller Road Thousand Oaks, CA 91320: SAGE Publications, 2016, vol. 2016, no. 2, pp. 137-155. ISSN 1741-2846.
 JARO© Jiří, VAVERKA Filip and TREEBY Bradley E. Spectral Domain Decomposition Using Local Fourier Basis: Application to Ultrasound Simulation on a Cluster of GPUs. International Journal of Supercomputing Frontiers and Innovations. South Ural State University (Chelyabinsk, Russia): Association for Computing Machinery, 2016, vol. 3, no. 3, pp. 39-54. ISSN 2313-8734.
 MERTA Michal, ZAPLETAL Jan and JARO© Jiří. Many Core Acceleration of the Boundary Element Method. In: Proceedings of High Performance Computing in Science and Engineering. Basel: Springer International Publishing, 2016, pp. 116-125. ISBN 978-3-319-40360-1.
 NIKL Vojtěch. High Performance Computing on Low Power Devices. In: Computer achitectures and diagnostics 2016. Brno: Faculty of Information Technology BUT, 2016, pp. 81-84. ISBN 978-80-214-5376-0.
 SUOMI Visa, JARO© Jiří, TREEBY Bradley E. and CLEVELAND Robin. Nonlinear 3-D simulation of high-intensity focused ultrasound therapy in the kidney. In: 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC). Orlando: Institute of Electrical and Electronics Engineers, 2016, pp. 5648-5651. ISBN 978-1-4577-0220-4.
 TREEBY Bradley E., JARO© Jiří and COX Ben T. Advanced photoacoustic image reconstruction using the k-Wave toolbox. In: SPIE Proceedings Vol. 9708: Photons Plus Ultrasound: Imaging and Sensing 2016. San Francisco: SPIE - the international society for optics and photonics, 2016, pp. 1-14. ISBN 978-1-62841-942-9.
 VAVERKA Filip. Case Study on Multi-domain Decomposition of k-Wave Simulation Framework. In: Computer achitectures and diagnostics 2016. Brno: Faculty of Information Technology BUT, 2016, pp. 37-40. ISBN 978-80-214-5376-0.
2015DVOŘÁK Václav and MIKU©EK Petr. Memory-Based Logic Control for Embedded Systems. Lecture Notes in Electrical Engineering. Berlin: Springer Verlag, 2015, vol. 325, no. 1, pp. 367-379. ISSN 1876-1100.
 JARO© Jiří, DOHNAL Matěj and TREEBY Bradley E. Large-scale Ultrasound Simulations with Local Fourier Basis Decomposition. The International Conference for High Performance Computing, Networking, Storage Analysis, SC15. Austin, 2015.
 JARO© Jiří, MAREK Jan and MEN©ÍK Pavel. Optimisation of Water Management Systems Using a GPU-Accelerated Differential Evolution. In: Proceedings of 2015 IEEE Symposium Series on Computational Intelligence. Cape Town: IEEE Computer Society, 2015, pp. 1727-1734. ISBN 978-1-4799-7560-0.
 JARO© Jiří, NIKL Vojtěch and TREEBY Bradley E. Large-scale Ultrasound Simulations Using the Hybrid OpenMP/MPI Decomposition. In: Proceedings of the 3rd International Conference on Exascale Applications and Software. Edinburgh: Association for Computing Machinery, 2015, pp. 115-119. ISBN 978-0-9926615-1-9.
 NIKL Vojtěch. High Performance Computing on Low Power Devices. In: Počítačové architektury a diagnostika 2015. Zlín: Faculty of Applied Informatics, Tomas Bata University in Zlín, 2015, pp. 37-41. ISBN 978-80-7454-522-1.

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